Genome-wide identification and expression analysis of the Small Ubiquitin-like Modifier (SUMO) gene family in Triticum aestivum L.

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dc.contributor.authorKesawa, Mahipal Singh
dc.contributor.authorKherawat, Bhagwat Singh
dc.contributor.authorReager, Madan Lal
dc.contributor.authorBadu, Meenakshi
dc.contributor.authorKabi, Mandakini
dc.contributor.authorMohanty, Ankita
dc.contributor.authorRaju, Kalidindi Krishnam
dc.contributor.authorLenka, Sangram K.
dc.contributor.authorAlamery, Salman Freeh
dc.contributor.authorAl-ateeq, Talak K.
dc.contributor.authorMasika, Fred Bwayo
dc.contributor.authorHong, Choo Bong
dc.date.accessioned2025-12-12T09:28:32Z
dc.date.available2025-12-12T09:28:32Z
dc.date.issued2025-12-11
dc.description.abstractBackground: Post-translational modification of proteins by SUMO is critical for a wide range of cellular and developmental processes. Although SUMO proteins have been extensively studied in animals and, to some extent, in Arabidopsis, their precise functions in other crop plants are still largely unknown. Results: In this research, we identified 31 TaSUMO genes in genome of wheat. Phylogenetic tree unveiled that genes clustered into thirteen subfamilies. Chromosomal mapping unveiled the dispersal of 31 TaSUMO genes across 11 wheat chromosomes. The eleven pairs of duplicated gene were identified in the SUMO family. Ka/Ks ratio revealed that 8 duplicated TaSUMO genes went through purifying purification. Furthermore, it was noted that TaSUMO genes displayed significant conversation in their gene structure. In addition, analysis of promoters uncovered the presence of numerous cis-regulatory elements in the promoter region of the TaSUMO genes. The differential expression patterns were observed among TaSUMO family members across various tissues and in response to multifaceted stress conditions. Moreover, this investigation explored the miRNAs targeted to TaSUMO genes and expression profile in various tissues. Conclusion: Thus, the results of this study establish a strong basis for further investigation of the functions of TaSUMO genes across different tissues, developmental stages, phytohormone responses, and diverse stress in wheat.
dc.description.sponsorshipOngoing Research Funding program (ORF-2025-241), King Saud University, Riyadh, Saudi Arabia
dc.identifier.citationKesawat, M.S., Kherawat, B.S., Reager, Badu, M., Kabi, M., Mohanty, A., Raju, K. K., Lenka, S.K., Alamery, S.F.,Al-ateeq, T.K., Masika, F.B.,& Hong, C.B. (2025). Genome-wide identification and expression analysis of the Small Ubiquitin-like Modifier (SUMO) gene family in Triticum aestivum L. BMC Genomics 26, 1098.
dc.identifier.issn1471-2164
dc.identifier.urihttps://dir.muni.ac.ug/handle/20.500.12260/817
dc.language.isoen
dc.publisherSpringer Nature
dc.subjectGene expression
dc.subjectTaSUMOs
dc.subjectMiRNA
dc.subjectPhylogenetic tress
dc.subjectPost-translational modifications and wheat
dc.titleGenome-wide identification and expression analysis of the Small Ubiquitin-like Modifier (SUMO) gene family in Triticum aestivum L.
dc.typeArticle

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